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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11353146 chr7:140177132 TG/T LOC441455 chr9:99488103-99489749:+ 0.49 5.98 5.0E-9 Box Plot
BLCA rs113562005 chr17:44818954 C/CA LOC644172 chr17:43677491-43679748:- 1.19 19.4 6.58E-59 Box Plot
BLCA rs113562005 chr17:44818954 C/CA LRRC37A4 chr17:43578685-43595516:- -0.6 -10.69 1.63E-23 Box Plot
BLCA rs113562005 chr17:44818954 C/CA MGC57346 chr17:43697712-43715327:+ 0.54 7.65 1.68E-13 Box Plot
BLCA rs113598761 chr11:77644646 C/T INTS4L1 chr7:64601603-64694600:+ 0.49 6.84 3.23E-11 Box Plot
BLCA rs113801120 chr11:77644824 G/A INTS4L1 chr7:64601603-64694600:+ 0.49 6.84 3.23E-11 Box Plot
BLCA rs11388212 chr3:72405521 T/TA TSPYL2 chrX:53111549-53117722:+ 0.35 6.08 2.94E-9 Box Plot
BLCA rs113925362 chr11:10181100 T/C C17orf67 chr17:54869274-54916134:- 0.67 6.1 2.55E-9 Box Plot
BLCA rs11411692 chr6:26570080 G/GT ZNF322B chr9:99957633-99961910:- 0.46 8.07 9.04E-15 Box Plot
BLCA rs11412419 chr14:39737658 C/CA LOC647288 chr13:75811890-75814517:- -0.4 -6.21 1.41E-9 Box Plot
BLCA rs11415474 chr6:26559491 T/TA ZNF322B chr9:99957633-99961910:- 0.44 7.57 2.79E-13 Box Plot
BLCA rs11429278 chr6:26570858 A/AC ZNF322B chr9:99957633-99961910:- 0.46 7.94 2.33E-14 Box Plot
BLCA rs11441808 chr6:28241864 C/CT BTN3A2 chr6:26365387-26378548:+ -0.38 -6.08 2.97E-9 Box Plot
BLCA rs114483872 chr1:144553654 G/T NBPF14 chr1:148003642-148025863:- 0.34 7.44 6.87E-13 Box Plot
BLCA rs11451431 chr15:33544618 G/GT CLEC1A chr12:10222153-10264226:- 0.66 6.28 9.3E-10 Box Plot